Class List

Here are the classes, structs, unions and interfaces with brief descriptions:

[detail level 123]

▼Natomic	Namespace with special functions and derivatives
CAtomicGlobal	For backwards compatibility with CppAD
CAtomicLocal	User interface to checkpointing using TMBad
▼Ndensity	Collection of multivariate Gaussian distributions (members listed in density.hpp)
CAR1_t	Stationary AR1 process
CARk_t	Stationary AR(k) process
CcontAR2_t	Continuous AR(2) process
CGMRF_t	Gaussian Markov Random Field
CMVNORM_t	Multivariate normal distribution with user supplied covariance matrix
CN01	Standardized normal distribution
CPROJ_t	Projection of multivariate gaussian variable
CSCALE_t	Apply scale transformation on a density
CSEPARABLE_t	Separable extension of two densitites
CUNSTRUCTURED_CORR_t	Multivariate normal distribution with unstructered correlation matrix
CVECSCALE_t	Apply a vector scale transformation on a density
▼NEigen
CAccessible_CholmodSupernodalLLT	Supernodal Cholesky factor with access to protected members
▼Ngauss_kronrod	Namespace with utility functions for adaptive numerical integration
Ccontrol	User control parameters for R's integrate
CIntegral	Interface to R's adaptive integrate routine
CmvIntegral	Multivariate integral class
▼Nnewton	Highly flexible atomic Newton() solver and Laplace() approximation
CHessianSolveVector	Operator (H, x) -> solve(H, x)
Cjacobian_dense_t	Methods specific for a dense hessian
Cjacobian_sparse_plus_lowrank_t	Methods specific for a sparse plus low rank hessian
Cjacobian_sparse_t	Methods specific for a sparse hessian
Cnewton_config	Newton configuration parameters
CNewtonOperator	Generalized newton solver similar to TMB R function 'newton'
Csafe_eval
CTagOp	Operator to mark intermediate variables on the tape
▼NR_inla	SPDE methods from INLA R-package
Cspde_aniso_t	Object containing all elements of an anisotropic SPDE object, i.e. eqn (20) in Lindgren et al
Cspde_t	Object containing all elements of an SPDE object, i.e. eqn (10) in Lindgren et al
▼Nradix	Radix based sorting and first_occurance
Cradix	Simple radix sort implementation
▼Nsparse_matrix_exponential	Sparse matrix exponentiation
Cconfig	Shared configuration parameters for expm_series and expm_generator
Cexpm_generator	Matrix exponential of generator matrix multiplied by vector
Cexpm_series	Matrix exponential multiplied by vector
▼NTMBad	Automatic differentiation library designed for TMB
Cad_plain_index	Construct ad_plain from index
Cadaptive	Enable weak comparison operators of an ad type
CADFun	Automatic differentiation function object
CADFun_packed	Container of ADFun object with packed input and output
CArgs	Argument class to handle array access of operator inputs and outputs
CAtomOp	Generic checkpoint operator
Cautopar	Split a computational graph using a simple heuristic
Cclique	Utilility class for sequential_reduction
Ccontrol	User control parameters for R's integrate
CDecomp2	Decomposition of computational graph
CDecomp3	Decomposition of computational graph
Cforbid_remap	Forbid remappings if not consecutive
CForwardArgs	Access input/output values during a forward pass. Write access granted for the output value only
►Cglobal	Struct defining the main AD context
Cad_aug	Augmented AD type
Cad_segment	Contiguous set of variables on the current tape
CAddDependencies	Add default implementation of mandatory member: dependencies
CAddForwardFromEval	Add default implementation of mandatory member: forward from optional member eval
CAddForwardFromEval< OperatorBase, 1 >	Unary case
CAddForwardFromEval< OperatorBase, 2 >	Binary case
CAddForwardIncrReverseDecr	Add default implementation of mandatory members: forward_incr and reverse_decr from forward and reverse
CAddForwardMarkReverseMark	Add default implementation of mandatory members: forward_mark and reverse_mark
CAddForwardReverse	Add default implementation of mandatory members: forward and reverse from forward_incr and reverse_decr
CAddIncrementDecrement	Add default implementation of mandatory members: increment and decrement
CAddInputSizeOutputSize	Add default implementation of mandatory members: input_size ans output_size
CComplete	Operator auto-completion
CCPL	Generate all mandatory members
CDynamicOperator	Operator that requires dynamic allocation. Compile time known input/output size
CDynamicOutputOperator	Operator that requires dynamic allocation. Compile time known input size
CFused	Fuse two operators
Chash_config	Configuration of hash_sweep
Cif_else	Utility for member completion
Cno_filter	Substitute of std::vector<bool> with all elements true
CNullOp	Empty operator without inputs or outputs
CNullOp2	Empty operator with inputs and outputs
Coperation_stack	Operation stack
COperator	Operator with input/output dimension known at compile time
COperatorPure	The abstract operator for the operation stack global::opstack
Cprint_config	Configuration of print method
CReferenceCounter	Reference counting
CRefOp	Reference a variable on another tape
CRep	Replicate an operator
CRepCompress	Replicate an operator and apply input compression
CZeroOp	Add zero allocated workspace to the tape
Cgraph	Operator graph in compressed row storage
CIndirectAccessor	Provide inplace read access to value or derivative arrays
CIntegral	Interface to R's adaptive integrate routine
Cintervals	Union of closed intervals
Cmultivariate_index	Utilility class for sequential_reduction
CmvIntegral	Multivariate integral class
Cold_state	Read the current tape's state and restore it on request
Comp_shared_ptr	Manage shared operator data across multiple threads
Cop_info	Bitwise collection of selected operator flags
CPackOp	Pack (PackOp) or unpack (UnpkOp) n consecutive values on the tape
CPackWrap	Transform a functor to have packed input/output
CParalOp	Parallel operator
CParametersChanged	Default tester for retaping_derivative_table
Cperiod	Representation of a period in a sequence
Cperiodic	Period analyzer
Cretaping_derivative_table	Adaptive derivative table used by AtomOp
CReverseArgs	Access input/output values and derivatives during a reverse pass. Write access granted for the input derivative only
Csegment_ref	Provide read/write access to an array segment
CSegmentRef	Representation of a specific contiguous set of values on a specific tape
Csequential_reduction	Sequential reduction algorithm
CSpJacFun_config	Configuration parameters for SpJacFun()
Csr_grid	Utilility class for sequential_reduction
Cstandard_derivative_table	Fixed derivative table used by AtomOp
CStdWrap	Interoperability with other vector classes
CUnpkOp	Pack (PackOp) or unpack (UnpkOp) n consecutive values on the tape.
▼Ntmbutils	Utility functions for TMB (automatically included)
Carray	Array class used by TMB
CConcat	Serialized representation of objects of different types
Cinterpol2D	Get a smooth representation of a data matrix
Cinterpol2D_config	Configuration for Interpol2D
Cmatexp	Matrix exponential: matrix of arbitrary dimension
Cmatexp< scalartype, 2 >	Matrix exponential: 2x2 case which can be handled efficiently
Cmatrix	Matrix class used by TMB
Corder	Taped sorting of a vector
Csplinefun	Spline Interpolation
Cvector	Vector class used by TMB
▼Nvectorize	Vectorized atomic functions
Cvector	Vector of consequtive values on the AD tape
Carray	Array class used by TMB
Cconfig_struct	Configuration variables of a user template
Cdata_indicator	Utilities for OSA residuals
Cmatrix	Matrix class used by TMB
Cparallel_accumulator	Helper to manage parallel accumulation
Cvector	Vector class used by TMB