tmb_core.hpp File Reference

Interfaces to R and CppAD. More...

#include <set>

Go to the source code of this file.

Classes
struct	data_indicator< VT, Type >
	Utilities for OSA residuals. More...
struct	parallel_accumulator< Type >
	Helper to manage parallel accumulation. More...

Macros
#define	ADREPORT(name)   TMB_OBJECTIVE_PTR -> reportvector.push(name, #name);
	Report an expression (scalar, vector, matrix or array valued) back to R with derivative information. More...
#define	DATA_ARRAY(name)
	Get data array from R and declare it as array<Type> More...
#define	DATA_ARRAY_INDICATOR(name, obs)
	Declare an indicator array 'name' of same shape as 'obs'. By default, the indicator array is filled with ones indicating that all observations are enabled. More...
#define	DATA_FACTOR(name)
	Get data vector of type "factor" from R and declare it as a zero-based integer vector. More...
#define	DATA_IARRAY(name)
	Get data array from R and declare it as array<int>
#define	DATA_IMATRIX(name)
	Get data matrix from R and declare it as matrix<int>
#define	DATA_INTEGER(name)
	Get data scalar from R and declare it as int.
#define	DATA_IVECTOR(name)
	Get data vector of type "integer" from R and declare it vector<int>. (DATA_INTEGER() is for a scalar integer)
#define	DATA_MATRIX(name)
	Get data matrix from R and declare it as matrix<Type>
#define	DATA_SCALAR(name)
	Get data scalar from R and declare it as Type.
#define	DATA_SPARSE_MATRIX(name)
	Get sparse matrix from R and declare it as Eigen::SparseMatrix<Type>
#define	DATA_STRING(name)
	Get string from R and declare it as std::string. More...
#define	DATA_STRUCT(name, struct)   struct<Type> name(getListElement(TMB_OBJECTIVE_PTR -> data, #name));
	Get data list object from R and make it available in C++. More...
#define	DATA_VECTOR(name)
	Get data vector from R and declare it as vector<Type> More...
#define	DATA_VECTOR_INDICATOR(name, obs)
	Declare an indicator vector 'name' of same shape as 'obs'. By default, the indicator vector is filled with ones indicating that all observations are enabled. More...
#define	NLEVELS(name)
	Get the number of levels of a data factor from R.
#define	PARAMETER(name)
	Get parameter scalar from R and declare it as Type.
#define	PARAMETER_ARRAY(name)
	Get parameter array from R and declare it as array<Type>
#define	PARAMETER_MATRIX(name)
	Get parameter matrix from R and declare it as matrix<Type>
#define	PARAMETER_VECTOR(name)
	Get parameter vector from R and declare it as vector<Type>
#define	REPORT(name)
	Report scalar, vector or array back to R without derivative information. More...
#define	SIMULATE   if(isDouble<Type>::value && TMB_OBJECTIVE_PTR -> do_simulate)
	Mark code that is only executed during simulation. More...
#define	TMB_OBJECTIVE_PTR   this
	Pointer to objective function used by DATA and PARAMETER macros. More...

Detailed Description

Interfaces to R and CppAD.

Definition in file tmb_core.hpp.